Malta offers some of the clearest waters in the Mediterranean, making it a haven for snorkelers. With its rocky coastlines, sandy beaches, and numerous caves, snorkeling here is always an adventure. We especially like the Private Boat Tour Experience with Snorkeling Blue Lagoon and Comino for its personalized approach and variety of stops, including the famous Blue Lagoon and Coral Lagoon. The chance to swim in crystal-clear waters and explore caves with your own guide makes this a top pick for those seeking a flexible, memorable day on the water. If you want a more intimate experience, check out the Comino Private Boat with Snorkeling and Cave Sightseeing, which offers a beautifully traditional “luzzu” boat, a knowledgeable crew, and a curated itinerary. For a shorter, budget-friendly option, the Snorkeling in Blue Lagoon Beaches and Bays Trip Comino provides a quick but scenic trip, perfect if you’re limited on time but still want to enjoy Malta’s marine beauty.
Below, you’ll find detailed descriptions of each tour, highlighting what makes them stand out—as well as practical tips to help you choose the right experience.
1. Private Boat Tour Experience with Snorkeling Blue Lagoon and Comino
This private boat tour typically lasts between 4 and 7 hours and covers Malta’s most iconic snorkeling spots. The tour includes stops at the world-famous Blue Lagoon, Coral Lagoon, Santa Maria Bay, and San Niklaw Bay, each offering different scenery and marine life. What makes this tour stand out is the personalized approach—your guide tailors the experience to your preferences, which is perfect for families or groups wanting flexibility. It supplies snorkeling equipment and provides bottled water and snacks, making it easy to relax and focus on enjoying the waters.
The itinerary is packed with highlights, from swimming in the Blue Lagoon’s turquoise waters to exploring the hidden caves of Santa Maria Bay. Many reviewers comment on the friendly, knowledgeable guides who make the experience memorable—like the one who said, “Johnny showed us some good sights and made the trip memorable.” The private nature of this tour ensures you won’t be crowded or rushed, and the sunset finish adds a special touch.
Bottom Line: This tour is best for those who want a flexible, private experience with personalized attention and a variety of snorkeling spots.
2. Comino Private Boat with Snorkeling and Cave Sightseeing
At number two, the Comino Private Boat with Snorkeling and Cave Sightseeing is a full-day, private adventure. It is priced per group (up to 15 people), which makes it a fantastic choice for families or friends traveling together. The tour uses a traditional luzzu boat, a colorful symbol of Maltese culture, adding a cultural touch to your trip.
The 4-hour itinerary includes stops at the Blue Lagoon, where you can swim in crystal waters and explore a natural cave you can swim through. The guide also takes you to San Niklaw Bay, known for its peaceful sands—ideal for families with children or anyone seeking a calmer spot. A highlight is the Santa Maria Caves, where you can swim inside a pond located within a cave, and your guide will show you how. This tour places a strong emphasis on local knowledge and personalized service, with guides eager to share their insights into the islands’ marine and terrestrial features.
Reviewers highlight the attentive captain and the quality of the experience, with comments like, “The skipper was lovely, attentive and friendly,” emphasizing the intimate nature of this tour. The combination of snorkeling, cave exploration, and traditional boat makes it stand out for cultural and marine enthusiasts alike.
Bottom Line: If you’re after a private, culturally rich experience with great snorkeling and cave exploration, this tour hits the mark.
3. Private Speedboat 2hrs Crystal & Blue Lagoon Caves & Snorkelling
This 2-hour speedboat tour offers a quick, high-energy way to see Malta’s top water spots. Costing just over $76 for a group of up to 12, it’s perfect for travelers short on time but eager to experience Malta’s stunning waters and caves. The tour focuses on the Blue Lagoon, Crystal Lagoon, and nearby caves, with a fast-paced, immersive ride.
The itinerary is simple but effective: you start with a visit to the Blue Lagoon—where you can jump into the water immediately—and then explore the Crystal Lagoon and nearby caves. The boat is equipped with Bluetooth speakers, so you can set your music to match the fun. Reviews mention that the captain was friendly and attentive, making sure everyone had a good time despite the brief window.
This tour is ideal for those who want a snapshot of Malta’s best snorkeling and cave sights without committing a full day. Because it’s shorter and more affordable, it’s also suitable for families or groups who want to combine this with other activities.
Bottom Line: A quick, lively trip for those who want to see the highlights with a sense of speed and fun.
4. Snorkeling in Blue Lagoon Beaches and Bays Trip Comino
For travelers on a budget or short on time, the Snorkeling in Blue Lagoon Beaches and Bays Trip offers a 4-hour experience at just under $58 per person. It focuses mainly on the Blue Lagoon and Santa Marija Bay, providing enough time to swim, snorkel, and enjoy some scenic coastlines.
This tour emphasizes casual exploration—you’ll have about an hour at the Blue Lagoon, swimming in its famed turquoise waters, and then a stop at Santa Marija Bay for relaxation. The tour is led by knowledgeable guides who help you explore the hidden caves and grottos along the coast, providing insight into the natural history of Malta.
While more basic than the private options, reviews note that it offers “ample time to explore each location” and points out the Blue Lagoon’s stunning beauty. It’s a good choice for travelers who want a straightforward, affordable snorkeling trip but don’t need the privacy or personalized touches of the higher-priced tours.
Bottom Line: An economical, no-fuss option for those wanting to experience Malta’s signature waters and caves.
How to Choose Your Malta Snorkeling Tour
When selecting your snorkeling experience, consider your budget, the amount of time you have, and whether you prefer a private or group tour. If privacy and customization are high priorities, the Private Boat Tour or the Comino Private Boat are excellent choices, especially if you want to combine snorkeling with cave exploration and cultural insights. For travelers on a tighter schedule or budget, the Blue Lagoon Beaches and Bays Trip provides a straightforward, enjoyable way to see some of Malta’s best snorkeling spots.
Think about your fitness level for swimming and exploring caves—most tours provide snorkeling gear, but check if you need any additional equipment. Also, most tours operate seasonally—spring and summer are ideal, but always book early to secure your preferred date, especially for the private options.
Final Thoughts
Malta’s clear waters and dramatic coastlines give every snorkeler something to enjoy. Whether you choose the personalized, all-day experience of the Private Boat Tour with Blue Lagoon or opt for the quick thrill of the speedboat tour, Malta’s waters won’t disappoint. For those seeking a cultural twist, the Comino Private Boat offers both marine adventure and local charm.
For families, the calmer, less crowded Blue Lagoon Beaches and Bays Trip is perfect, while the private tours offer a more intimate way to explore Malta’s underwater world. Remember to book early—these tours fill up quickly during the high season. Whatever your style, Malta’s waters await—happy snorkeling!
Enjoy Malta’s stunning coastline and vibrant marine life—your perfect snorkeling adventure is just a booking away.