Malta: Gozo, Comino Island and Blue Lagoon Cruise

Discover Malta’s quieter islands with this 6.5-hour boat tour, featuring Blue Lagoon snorkeling, Gozo exploration, and scenic caves.

If you’re after a way to see some of Malta’s most stunning spots without the hassle of crowded tours or complicated logistics, this Malta: Gozo, Comino Island, and Blue Lagoon Cruise might just be what you’re looking for. It’s a well-rounded experience that combines scenic boat rides, cultural stops, and plenty of time to relax in gorgeous waters.

What really catches our eye are two things: first, the chance to explore lesser-known islands like Gozo and Comino, away from the busy main island, and second, the opportunity to snorkel in the famous Blue Lagoon—a highlight for many travelers. That said, a potential drawback is the relatively tight schedule, with only about 1.5 hours at the Blue Lagoon and similar time in Gozo, which might leave some wishing they had more time to explore each stop thoroughly.

This tour suits travelers who love a good boat trip, want to see Malta’s coast from a different perspective, and enjoy a mix of sightseeing and relaxing in beautiful waters. If you’re okay with a full day packed with activity and don’t mind the crowds on the boat, it’s a solid choice. Families, couples, or groups looking for a memorable day on the water can all find value here, especially if they appreciate a friendly crew and scenic views.

Key Points

Malta: Gozo, Comino Island and Blue Lagoon Cruise - Key Points

  • Well-organized Trip: The tour covers significant sights in one day, including Gozo, Comino, and the Blue Lagoon.
  • Comfortable Facilities: Features like snorkeling masks, showers, toilets, and sun decks make the trip more enjoyable.
  • Engaging Guides: Live commentary in English and Italian helps you understand what you’re seeing.
  • Relaxing Experience: Smaller boat size and less crowded atmosphere mean a more relaxed day.
  • Limited Free Time: Only about 1.5 hours at the Blue Lagoon and in Gozo, so plan to make the most of your time.
  • Value for Money: With scenic cruising, snorkeling, and a visit to both islands, it’s a good deal for the experience you get.

When it comes to sightseeing around Malta, a boat tour like this is often one of the best options to cover a lot of ground in a single day. We’re talking about a 6.5-hour journey that takes you along the rugged Maltese coast, out to the quiet islands of Gozo and Comino, and ends with the legendary Blue Lagoon. It’s a mix of natural beauty, fun water activities, and some light cultural sightseeing.

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Starting Point and Overall Structure

Malta: Gozo, Comino Island and Blue Lagoon Cruise - Starting Point and Overall Structure

The adventure begins in Bugibba at Sirens Quay, with boarding closing at 10 AM. The boat, operated by Seahorse Cruises Malta, is described as small and authentic, which is a breath of fresh air compared to the larger, more crowded vessels. This smaller size means more space and a vibe that’s a little more intimate, which is often more comfortable and less hectic.

The tour’s route has been carefully planned to maximize your sightseeing and relaxation. You’ll cruise past St. Paul’s Island, Mellieha Bay, and Smuggler’s Cove before reaching Gozo. The itinerary includes a visit to Victoria, the capital city of Gozo, where you can explore at your own pace for about two hours. Later, the boat heads to Comino, where you’ll spend 1.5 hours at the Blue Lagoon — a crystal-clear paradise perfect for swimming and snorkeling.

The return cruise includes a scenic pass-by of the Santa Maria caves and the iconic Elephants Head rock formation, wrapping up around 5 PM back at Sirens Quay.

What To Expect at Each Stop

Malta: Gozo, Comino Island and Blue Lagoon Cruise - What To Expect at Each Stop

1. Start at Sirens Quay

The day kicks off early with a smooth boarding process. The boat is described as well-equipped, with a diving platform, sundeck, toilet, outdoor shower, and plenty of space to relax. The crew is praised for their friendliness and helpfulness, which makes the overall experience more pleasant.

2. Sightseeing Cruise

The first leg of the trip provides a scenic overview of Malta’s coastline. Passengers have the opportunity to take photos of the rugged cliffs and natural caves from the boat, with lively commentary in English and Italian that helps bring the scenery to life.

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3. Blue Lagoon Photo Stop

The highlight for many is the Blue Lagoon, with a 1.5-hour stop. The lagoon’s turquoise waters are famously inviting — perfect for swimming, snorkeling, or just relaxing on the boat. The tour anchors away from the crowd, offering a peaceful spot to enjoy this natural wonder. Snorkeling masks are provided, although a 10-euro deposit is required, so come prepared with cash.

We loved hearing from travelers who described this part as “incredible” and “the highlight,” especially those who jumped into the water for a quick swim. The fact that the boat has facilities to shower and change makes this a comfortable experience, even after a swim.

4. Exploring Gozo’s Capital, Victoria

The stop in Gozo is about two hours long. You’ll be transported to Victoria by shuttle, giving you a chance to poke around the charming Gozitan streets and markets. Some reviews mention that the short time means you only get a brief taste of this quieter, more traditional Maltese island. Still, it’s enough to snap some photos and buy souvenirs like fridge magnets.

One traveler praised the “genuine Maltese charm” they found there, while others noted that the quick visit is better suited for those not looking for a full day of exploring.

5. Comino and the Caves

After the Gozitan visit, the boat heads toward Comino for another scenic stop. The caves around Comino are a favorite among travelers who enjoy exploring sea caves and watching the rock formations like the Elephant’s Head. The trip includes a pass-by view, with a quick 10-minute sightseeing stop.

6. Return Journey: Santa Maria Caves and Scenic Views

On the return trip, you’ll cruise past the Santa Maria caves and enjoy the panoramic views of Malta’s coast. The captain and crew are often praised for their friendly demeanor and explanations, which add context to what you’re seeing.

Practical Details and What You Need to Know

Malta: Gozo, Comino Island and Blue Lagoon Cruise - Practical Details and What You Need to Know

The tour includes live commentary, snorkel masks, shower facilities, toilets, and a sun deck — all thoughtful touches that elevate the experience. The boat is small, which helps keep the atmosphere relaxed and less crowded, but this also means that if you’re someone who prefers large group tours, it might feel a little intimate.

Food and drinks are available for purchase on board, but there’s no included lunch, so plan accordingly. You’ll also need to bring cash for on-board purchases and deposits.

A key note for future travelers: if you want to step onto the Blue Lagoon beach itself, you must pre-book a free QR code for a specific timeslot, starting at 1:30 PM. This is a new regulation by Maltese authorities, so be sure to reserve early if that’s a priority.

The tour is suitable for all ages, but it’s not recommended for those with mobility impairments, mainly because of the transportation and walking involved.

The Verdict: Is It Worth It?

Malta: Gozo, Comino Island and Blue Lagoon Cruise - The Verdict: Is It Worth It?

Based on reviews and descriptions, this tour offers solid value. The boat’s smaller size and friendly crew make it stand out among larger, more crowded options. You get a nice mix of scenic cruising, cultural exploration, and leisure time in a natural setting.

Many travelers have praised the quality of the guides, the stunning views, and the relaxed atmosphere. People also appreciate that the boat is not overcrowded, which can make the day feel more special and less rushed.

However, the limited free time at each stop is something to consider. If you’re the type of traveler who loves to explore every nook and cranny, you might feel a bit rushed. But if your goal is to see key highlights, relax, and enjoy good waters, it’s a well-balanced trip.

Pricing is reasonable for the experience, especially given the included activities and facilities. Plus, the option to reserve and pay later adds flexibility.

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Malta: Gozo, Comino Island and Blue Lagoon Cruise



4.4

(458 reviews)

“Owen was a genuinely nice guy, who creates an experience for his guests. The boat was not crowded like the others so it was really relaxing.”

— Alan, June 20, 2025

Who Is This Tour Best For?

Malta: Gozo, Comino Island and Blue Lagoon Cruise - Who Is This Tour Best For?

This trip is perfect for those who want an easy, scenic day on the water without dealing with the logistics of island-hopping on their own. It suits travelers who appreciate small boat intimacy, friendly guides, and a well-organized schedule. It’s ideal for families, couples, or groups looking for a memorable outing, especially if they enjoy snorkeling or just lounging on deck.

It might be less suitable for travelers with mobility issues or those wanting more in-depth exploration of Gozo or Comino but is a strong choice for those who want a beautiful, relaxing, and well-paced day out.

All in all, this Malta boat tour offers a chance to see the best of Malta’s quieter islands with a friendly crew, comfortable facilities, and plenty of stunning scenery. It’s not the longest or most in-depth tour but hits the right notes for a memorable day packed with natural beauty, light adventure, and relaxed fun.

If you’re after a straightforward, scenic day with a good balance of activities and downtime, this trip should be on your list. Just remember to make your Blue Lagoon booking early if you want to step onto the sands and take a swim during the peak hours.

What is the tour duration?
The tour lasts about 6.5 hours, starting around 10:30 AM and returning by 5 PM.

What are the main highlights of the trip?
You’ll visit Gozo’s capital, Victoria, enjoy a swim and snorkel at the Blue Lagoon, explore Comino caves, and see scenic coastlines and caves along the way.

Is the boat crowded?
No, reviews consistently mention that the boat is smaller and less crowded than larger tours, making for a more relaxed experience.

What facilities are available on board?
There are snorkeling masks (deposit required), showers, toilets, outdoor showers, a sun deck, and a diving platform.

Can I buy food and drinks on board?
Yes, snacks and drinks are available for purchase, but no included meals. It’s best to bring cash for extras.

Is it suitable for children?
Yes, the tour is described as suitable for all ages, but keep in mind the boat’s facilities and the outdoor environment.

How do I book the Blue Lagoon step-on?
You must reserve a free QR code for a specific timeslot (from 1:30 PM to 5:30 PM) to step onto the Blue Lagoon beach, due to new Maltese regulations.

What if the weather is bad?
The captain and activity provider reserve the right to cancel or alter the trip based on weather conditions, tides, or safety reasons.

This boat tour is a great way to experience Malta’s natural beauty with a relaxed, friendly vibe. Whether you’re snorkeling in the Blue Lagoon or exploring Gozitan streets, it’s a memorable way to spend a day on the water.

You can check availability for your dates here: